Ganes C. Sen Ph.D.

Department Chair

The Thomas Lord Endowed Chair in Molecular Biology

  • Department of Molecular Genetics
  • Lerner Research Institute/NE20
  • 9500 Euclid Avenue
  • Cleveland, Ohio 44195
  • seng@ccf.org
  • (216) 444-0636
  • (216) 444-0513

My research interest is in understanding how mammals respond to virus infection, both at the cellular level and at the organism level. The interferon (IFN) system plays a major role in shaping the innate immune antiviral response and a focus of our research is on the analysis of the mechanism of IFN induction by virus infection; we are deciphering the signaling mechanism of Toll like receptor 3 and the RIG-I-like helicase receptors, which are activated by viruses. We uncovered an unexpected link between innate immunity and growth factor receptors by our observation that the EGF receptor is essential for TLR3 signaling. Another focus of our research is on understanding the mode of antiviral actions of a set of IFN-induced proteins, called IFITs. Recently we have generated several mouse strains in which one or more IFIT genes have been knocked-out. Challenging these genetically modified mice with different viruses has revealed interesting and unexpected facets of IFN-action. It appears that a specific IFN-induced protein can inhibit the replication of only a limited set of viruses in a specific cell type. Thus, Ifit2, but not Ifit1, can inhibit the replication of vesicular stomatitis virus in neurons but not in other cell types. Another study has revealed that IRF-3, a transcription factor responsible inducing IFN synthesis, has an unrelated second function. Upon activation by virus infection, it triggers apoptosis by transporting the pro-apoptotic protein, Bax, to mitochondria. The apoptotic action of IRF-3, in addition to its transcriptional action, protects mice from viral pathogenesis.

In other words ...

Many components of our immune system protect us from microbial infection; among them is the interferon system, the primary line of defense against viruses. Virus infection is often self limiting because it triggers the synthesis of many antiviral proteins, including interferon, which ultimately inhibit virus replication. We want to understand how cells sense virus infection, how this sensing leads to induced synthesis of the antiviral proteins and how specific members of this family of protein protect us from specific viruses.

  • Sudip Bandyopadhyay Ph.D.
  • Project Staff
  • Location:NN1-12
  • Phone:(216) 444-0888
  • Fax:(216) 444-0512
  • bandyos@ccf.org
  • Saurabh Chattopadhyay Ph.D.
  • Project Staff
  • Location:NE2-205
  • Phone:(216) 444-0894
  • Fax:(216) 444-0512
  • chattos@ccf.org
  • Volker Fensterl Ph.D.
  • Research Associate
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • fenstev@ccf.org
  • Patricia Kessler M.S.
  • Principal Research Technologist
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • kesslep@ccf.org
  • Teodora Kuzmanovic B.A.
  • Research Technician
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • kuzmant@ccf.org
  • Darshana Poddar Ph.D.
  • Postdoctoral Research Fellow
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • poddard@ccf.org
  • Brandon Pool B.A.
  • Research Technician
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • poolb@ccf.org
  • Muraleedharan Manoj Veleeparambil Ph.D.
  • Postdoctoral Research Fellow
  • Location:NE2-250
  • Phone:(216) 444-0893
  • veleepm@ccf.org
  • Xin Wang Ph.D.
  • Postdoctoral Research Fellow
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • wangx5@ccf.org
  • Ying Zhang M.S.
  • Lead Research Technologist
  • Location:NE2-250
  • Phone:(216) 444-0893
  • Fax:(216) 444-0512
  • zhangy3@ccf.org

Daffis S, et al. 2’-O Methylation of the viral mRNA cap evades host restriction by IFIT family members. 2010. Nature. 468: 452-456. PMCID: PMC3058805.

Chattopadhyay S, et al. The IRF-3/Bax-Mediated Apoptotic Pathway, Activated by Viral Cytoplasmic RNA and DNA, Inhibits Viral Replication. 2011. J Virol. 85: 3708-3716. PMCID: PMC3126131. 

White CL, et al. Phosphatidylinositol 3-Kinase Signaling Delays Sendai Virus-Induced Apoptosis by Preventing XIAP Degradation. 2011. J Virol. 85: 5224-5227. PMCID: PMC3126159.

Yamashita, M., et al. A TRIF-Independent Branch of TLR3 Signaling. 2012. J Immunol. 188: 2825-2833. PMCID: PMC3386560.

Fensterl V, et al. Interferon-induced Ifit2/ISG54 Protects Mice from Lethal VSV Neuropathogenesis. 2012. PLoS Pathog. 8: e1002712. PMCID: PMC3355090.

Yamashita M, et al. Epidermal growth factor receptor is essential for toll-like receptor 3 signaling. 2012. Sci. Signal. 5, ra50. PMCID: PMC3431157.